NCTA designated transit routes for road traffic  
Kenya
From By way of To
Mombasa Nairobi-Kisumu Busia
Mombasa Nairobi-Eldoret Malaba

Burundi
From By way of To
Upper Akanyaru Kanyaza - Bujumbura Gatumba
Gisenyi Kirundo - Ngozi Bujumbura
Luhwa Rugomba - Bujumbura Upper Akanyaru

Rwanda
From By way of To
Kagitumba Kigali - Butare Upper Akanyaru
Kagitumba Kigali - Butare Cyangugu
Kagitumba Kigali - Ruhengeri Gisenyi
Gatuna Kigali - Butare Upper Akanyaru
Gatuna Kigali - Butare Cyangugu
Gatuna Kigali - Ruhengeri Gisenyi
Cyangugu   Bugarama
Cyanika Ruhengeri Gisenyi
Uganda
From By way of To
Malaba Jinja-Kampala-Masaka-Kabale Katuna
Malaba Jinja-Kampala Ishasha River
Malaba Jinja-Kampala Mpondwe
Malaba Tororo Goli
Malaba Tororo Arua
Busia Jinja-Kampala-Masaka-Kabale Katuna
Busia Jinja-Kampala Ishasha River
Busia Jinja-Kampala Mpondwe
Busia Tororo Goli
Busia Tororo Arua
Kasese Ishaka-Ntungamo Kagitumba
Kasese   Mpondwe
Kasese   Ishasha River

Democratic Republic of Congo
From By way of To
Aru Bunia Kisangani or Isiro
Mahagi Bunia Kisangani or Isiro
Kasindi Beni Kisangani or Bunia
Ishasha   Goma Ville
Goma Ville   Goma
Bukavu Kindu Kisangani
Kiliba Uvira Kalundu
Kavimvira Uvira Kalundu
Kamanyora Bukavu Kalundu